Drone Lidar Deep Learning for Fine-Scale Bare Earth Surface and 3D Marsh Mapping in Intertidal Estuaries

Tidal marshes are dynamic environments providing important ecological and economic services in coastal regions. With accelerating climate change and sea level rise (SLR), marsh mortality and wetland conversion have been observed on global coasts. For sustainable coastal management, accurate projection of SLR-induced tidal inundation and flooding requires fine-scale 3D terrain of the intertidal zones. The airborne Lidar systems, although successful in extracting terrestrial topography, suffer from high vertical uncertainties in coastal wetlands due to tidal effects. This study tests the feasibility of drone Lidar leveraging deep learning of point clouds on 3D marsh mapping. In an ocean-front, pristine estuary dominated by Spartina alterniflora, drone Lidar point clouds, and in-field marsh samples were collected. The RandLA-Net deep learning model was applied to classify the Lidar point cloud to ground, low vegetation, and high vegetation with an overall accuracy of around 0.84. With the extracted digital terrain model and digital surface model, the cm-level bare earth surfaces and marsh heights were mapped. The bare earth terrain reached a vertical accuracy (root-mean-square error, or RMSE) of 5.55 cm. At the 65 marsh samples, the drone Lidar-extracted marsh height was lower than the in-field height measurements. However, their strongly significantly linear relationship (Pearson’s r = 0.93) reflects the validity of the drone Lidar for measuring marsh canopy height. The adjusted Lidar-extracted marsh height had an RMSE of 0.12 m. This experiment demonstrates a multi-step operational procedure to deploy drone Lidar for accurate, fine-scale terrain and 3D marsh mapping, which provides essential base layers for projecting wetland inundation in various climate change and SLR scenarios.